Gene expression and patient clinical data for breast cancer

A dataset containing gene expression measurements along with a number of clinical variables

Usage

miller

Format

A list with named components:

x

a named matrix with 253 rows and 11331 columns containing gene expression data. Column names are patient ids to match the clinical data while row names provide information about the measured genes.

clinical

data frame of clinical data for the patients (age, survival status, lymph node involvement, age, subtype, etc.)

Source

Lance D Miller et al. An expression signature for p53 status in human breast cancer predicts mutation status, transcriptional effects, and patient survival. Proceedings of the National Academy of Sciences, 102(38): 13550–13555, 2005.